PhosphoNET

           
Protein Info 
   
Short Name:  LSMD1
Full Name:  LSM domain-containing protein 1
Alias:  LSM domain containing 1; LSM domain-containing 1; PFAAP2; Phosphonoformate immuno-associated protein 2
Type: 
Mass (Da):  13514
Number AA:  125
UniProt ID:  Q9BRA0
International Prot ID: 
Sequence:  Retrieve full protein sequence
   
GO Terms  External Links Internal Links  
   
Cellular Component:  GO:0005737  GO:0005634   Uniprot OncoNet
Molecular Function:      PhosphoSite+ KinaseNET
Biological Process:      Phosida TranscriptoNet
    STRING Kinexus Products
   
Info Box  A variety of parameters were considered in the selection of putative P-sites. Confirmed P-Sites have lower Hydrophobicity Scores. The P-site Similarity Score is lower the more that it resembles typical confirmed corresponding P-Ser, P-Thr or P-Tyr sites. The Maximum KInase Score provides the calculated score for highest match of 500 human protein kinases for the amino acid sequence surrounding the target P-site as determined with Kinase Substrate Predictor V2. The Sum KInase Score provides the additive sum of the positive individual Kinase Substrate Predictor V2 scores from 500 human protein kinases. The Conservation Score is the average of the percent similarity of the human P-site with the equivalent P-site in 20 other diverse species. Click the coloured buttons below to retrieve this and other information in the Info Box, or click the orange buttons for relevant links.
Phosphosites 
-7-6-5-4-3-2-101234567Expt. conf.EffectKinasePPaseKinexus ProductsRef.Evol.Kinase Pred.P-site Match
Site 1S18REENGCCSRRQSSSS
Site 2S22GCCSRRQSSSSAGDS
Site 3S23CCSRRQSSSSAGDSD
Site 4S24CSRRQSSSSAGDSDG
Site 5S25SRRQSSSSAGDSDGE
Site 6S29SSSSAGDSDGEREDS
Site 7S36SDGEREDSAAERARQ
Site 8T52LEALLNKTMRIRMTD
Site 9T58KTMRIRMTDGRTLVG
Site 10S88AQEFLKPSDSFSAGE
Site 11S90EFLKPSDSFSAGEPR
Site 12S92LKPSDSFSAGEPRVL
Site 13S118SIEVQRESLTGPPYL
Site 14T120EVQRESLTGPPYL__
 
Legend 
Confirmed in mammals
Confirmed in related proteins or other species
Predicted by Kinexus P-Site Prediction algorithm
No data/link available
Link available  
Products available
 


2019 Kinexus Bioinformatics Corporation